Cre16.g679450.t1.2 PIN domain-like family protein

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g679450.t1.2 chromosome_16 PIN domain-like family protein CDS 5639707 5642255 + 2 548
Locus Genomic View Functional Annotation
Cre16.g679450.t1.2 Cre16.g679450.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g16521.t1, Cre16.g679450.t1.1 JGI396763 30777816 Search
Motif 1 Motif 2 Residual
bicluster_0071

motif_0071_1

e.value: 
0.0095
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
nGCtGttCcgGctgcTgCTGg

motif_0071_2

e.value: 
0.026
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
GcAAactaataAcaaAacAanctt
0.17
bicluster_0162

motif_0162_1

e.value: 
0.000013
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
CnGCGGCGGcGGCaG

motif_0162_2

Motif Bicluster: 
Width: 
0
Number of Sites: 
1
0.26
GO:0032040 -

small-subunit processome

GO Category: 
cellular_component
Details: 
A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI396763
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