Cre16.g694850.t1.2 arginine biosynthesis protein ArgJ family

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g694850.t1.2 chromosome_16 arginine biosynthesis protein ArgJ family CDS 196636 203571 - 6 935

Phytozome

Locus Genomic View Functional Annotation
Cre16.g694850.t1.2 Cre16.g694850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NGS1 g15573.t1, Cre16.g694850.t1.1 JGI288806 30777140 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0063
motif_0063_1

motif_0063_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6e-22
Motif Bicluster: 
bicluster_0063
Width: 
24
Number of Sites: 
1
Consensus: 
CtGCcGCcgCtGCtaCTGCtGccg
motif_0063_2

motif_0063_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000002
Motif Bicluster: 
bicluster_0063
Width: 
21
Number of Sites: 
1
Consensus: 
CGcaGCCGCTGCaGCTGgcGC
 0.22
bicluster_0101
motif_0101_1

motif_0101_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.4e-17
Motif Bicluster: 
bicluster_0101
Width: 
24
Number of Sites: 
1
Consensus: 
cnGCTGctggTGCtGcTaCTGccG
motif_0101_2

motif_0101_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000043
Motif Bicluster: 
bicluster_0101
Width: 
21
Number of Sites: 
1
Consensus: 
caGCTgCAGcgGCaGctGCgg
 0.34

GO Terms

GO:0004358 GO:0006526 -

glutamate N-acetyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: N(2)-acetyl-L-ornithine + L-glutamate = N-acetyl-L-glutamate + L-ornithine.

arginine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI288806

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