Cre17.g696350.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g696350.t1.2 chromosome_17 CDS 36711 39805 - 3 094

Phytozome

Locus Genomic View Functional Annotation
Cre17.g696350.t1.2 Cre17.g696350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g16891.t1, Cre17.g696350.t1.1 Not available 30782536 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0146
motif_0146_1

motif_0146_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000081
Motif Bicluster: 
bicluster_0146
Width: 
15
Number of Sites: 
1
Consensus: 
CAgCAGCAcCaGCAg
motif_0146_2

motif_0146_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7400
Motif Bicluster: 
bicluster_0146
Width: 
15
Number of Sites: 
1
Consensus: 
CAGCAAgcTGCAAGC
 0.22
bicluster_0193
motif_0193_1

motif_0193_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000063
Motif Bicluster: 
bicluster_0193
Width: 
23
Number of Sites: 
1
Consensus: 
CACaCacacatACACaCAtgCAa
motif_0193_2

motif_0193_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0193
Width: 
24
Number of Sites: 
1
Consensus: 
gaGGtaGCAGtgGCgGgGGcaGCG
 0.15

GO Terms

GO:0005261 GO:0015672 GO:0016020 -

cation channel activity

GO Category: 
molecular_function
Details: 
Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient.

monovalent inorganic cation transport

GO Category: 
biological_process
Details: 
The directed movement of inorganic cations with a valency of one into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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