Cre17.g708400.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g708400.t1.2 chromosome_17 CDS 1664129 1675594 - 11 465

Phytozome

Locus Genomic View Functional Annotation
Cre17.g708400.t1.2 Cre17.g708400.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SUB12 g17163.t1, Cre17.g708400.t1.1 Not available 30782893 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0005
motif_0005_1

motif_0005_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.9e-20
Motif Bicluster: 
bicluster_0005
Width: 
21
Number of Sites: 
1
Consensus: 
cCgcCaCCacCgCCacCnCCn
motif_0005_2

motif_0005_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0057
Motif Bicluster: 
bicluster_0005
Width: 
11
Number of Sites: 
1
Consensus: 
ACAaACAcAcA
 0.49
bicluster_0032
motif_0032_1

motif_0032_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00032
Motif Bicluster: 
bicluster_0032
Width: 
21
Number of Sites: 
1
Consensus: 
TGcTGcTncTGctGttgcTGC
motif_0032_2

motif_0032_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0032
Width: 
0
Number of Sites: 
1
 0.26

GO Terms

GO:0004252 GO:0006508 -

serine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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