Cre17.g746547.t1.1 Basic-leucine zipper (bZIP) transcription factor family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g746547.t1.1 chromosome_17 Basic-leucine zipper (bZIP) transcription factor family protein CDS 7009739 7013345 - 3 606

Phytozome

Locus Genomic View Functional Annotation
Cre17.g746547.t1.1 Cre17.g746547.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g18047.t1, Cre20.g758600.t1.1, Cre20.g758600.t1.2 Not available 30782012 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0023
motif_0023_1

motif_0023_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000034
Motif Bicluster: 
bicluster_0023
Width: 
21
Number of Sites: 
1
Consensus: 
gAGCTgcgGaAGgAGCAGcAG
motif_0023_2

motif_0023_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000021
Motif Bicluster: 
bicluster_0023
Width: 
24
Number of Sites: 
1
Consensus: 
TaTcTTaAtgtcTccaGAnantAA
 0.10
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18

GO Terms

GO:0003700 GO:0043565 GO:0006355 -

sequence-specific DNA binding transcription factor activity

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

sequence-specific DNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

regulation of transcription, DNA-dependent

GO Category: 
biological_process
Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-dependent transcription.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

Interaction Target Module Weight
up-regulates bicluster_0105 0.06
up-regulates bicluster_0121 0.03

String Network

Link to STRING STRING Network

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