PHATRDRAFT_10585 dna ligase i (Adenylation_DNA_ligase_like superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_10585 chr_3 dna ligase i (Adenylation_DNA_ligase_like superfamily) 1338800 1340140 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0485

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0022
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Adenylation_DNA_ligase_like superfamily Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases; ATP-dependent... - 189.304 2.97E-58 1 - 183 superfamily 264509
OBF_DNA_ligase_family superfamily The Oligonucleotide/oligosaccharide binding (OB)-fold domain is a DNA-binding module that is part... - 140.69 1.67E-40 188 - 329 superfamily 263645

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 179668 295630 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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