PHATRDRAFT_10774 50s ribosomal protein l15 (rplO)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10774	chr_4	50s ribosomal protein l15 (rplO)	359779	360282	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0140

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0124	0.32	19000 62000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rplO		50S ribosomal protein L15; Reviewed	cl12022	183.371	2.98E-59	5 - 156	specific	235523
Ribosomal_L18e superfamily		Ribosomal protein L18e/L15; This family includes eukaryotic L18 as well as prokaryotic L15.	-	183.371	2.98E-59	5 - 156	superfamily	264513

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31451		Not available	210425	70521	457670	Cre14.g612450.t1.2	AT3G25920.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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