PHATRDRAFT_11003 pyruvate formate lyase activating enzyme 2 fe-s cluster domain (Radical_SAM)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11003	chr_4	pyruvate formate lyase activating enzyme 2 fe-s cluster domain (Radical_SAM)	373605	374495	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0059

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0232	0.25	8.9 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	44.6318	7.41E-06	45 - 215	superfamily	100105
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	44.6318	7.41E-06	45 - 215	superfamily	100105
Radical_SAM		Radical SAM superfamily; Radical SAM proteins catalyse diverse reactions, including unusual...	-	56.3895	4.13E-10	40 - 216	multi-dom	252342

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	215449	282208	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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