PHATRDRAFT_11009 snf2 domain-containing protein (HepA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11009 chr_4 snf2 domain-containing protein (HepA) 1082486 1084393 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0153

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 84.2116 2.64E-19 337 - 477 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 84.2116 2.64E-19 337 - 477 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 78.5332 3.57E-17 21 - 167 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 78.5332 3.57E-17 21 - 167 superfamily 266587
HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and... - 312.054 1.11E-95 1 - 531 multi-dom 223627

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
35723 Not available 147555 300894 Not available Not available AT3G54280.1 489603

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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