PHATRDRAFT_11088 leucyl-trnacytoplasmic (leucine--trna ligase) (PLN02959)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11088 chr_4 leucyl-trnacytoplasmic (leucine--trna ligase) (PLN02959) 756420 759840 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0141

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 105.793 1.41E-24 49 - 213 superfamily 260139
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 111.914 2.27E-28 785 - 905 superfamily 264512
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 105.793 1.41E-24 49 - 213 superfamily 260139
PLN02959 aminoacyl-tRNA ligase - 1817.75 0 8 - 1086 multi-dom 215518

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39979 Not available 265074 234234 462265 Cre06.g293582.t1.1 AT1G09620.1 556845

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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