PHATRDRAFT_11116 short-chain dehydrogenase reductasesuperfamily protein (NADB_Rossmann superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11116	chr_4	short-chain dehydrogenase reductasesuperfamily protein (NADB_Rossmann superfamily)	233129	233554	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0439

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0074	0.46	77000 83000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	163.164	3.21E-50	1 - 142	superfamily	263925
FabG		Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [...	-	88.7213	3.50E-22	1 - 142	multi-dom	223959

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	228093	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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