PHATRDRAFT_11391 tpr domain containingexpressed (TPR)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11391	chr_5	tpr domain containingexpressed (TPR)	566583	567089	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0138

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	51.612	1.19E-09	13 - 81	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	51.612	1.19E-09	13 - 81	superfamily	238112
TPR_11		TPR repeat; TPR repeat.	-	48.8491	5.84E-09	13 - 80	multi-dom	257739

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
19262		Not available	189362	220217	445018	Cre02.g075100.t2.1	AT4G30480.2	460986

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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