PHATRDRAFT_11409 structure specific recognition protein 1 (PH1_SSRP1-like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11409	chr_5	structure specific recognition protein 1 (PH1_SSRP1-like)	888895	889374	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0103	0.38	3.8 5600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PH1_SSRP1-like		Structure Specific Recognition protein 1 (SSRP1) Pleckstrin homology (PH) domain, repeat 1; SSRP1...	cl17171	177.346	4.66E-57	1 - 122	specific	241384
PH-like superfamily		Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and...	-	68.2894	1.47E-15	124 - 160	superfamily	266526
PH-like superfamily		Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and...	-	68.2894	1.47E-15	124 - 160	superfamily	266526

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262574		Not available	156478	250897	414529	Cre01.g029450.t1.1	AT3G28730.1	348389

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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