PHATRDRAFT_1199 leucine-rich repeat family protein (AMN1 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1199 chr_13 leucine-rich repeat family protein (AMN1 superfamily) 792245 794162 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0311

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0001
 0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AMN1 superfamily Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in... - 39.2328 0.00110538 316 - 444 superfamily 187754
AMN1 superfamily Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in... - 39.2328 0.00110538 316 - 444 superfamily 187754
AMN1 superfamily Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in... - 39.2328 0.00110538 316 - 444 superfamily 187754
LRR_8 Leucine rich repeat; Leucine rich repeat. - 34.4357 0.00907219 128 - 190 multi-dom 258126
COG4886 Leucine-rich repeat (LRR) protein [Function unknown] - 38.7958 0.00240952 257 - 437 multi-dom 227223

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
16210 Not available 259809 184727 420548 Cre11.g467559.t1.1 AT1G15740.1 491927

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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