PHATRDRAFT_12155 nadph:protochlorophyllide oxidoreductase a (PLN00015)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12155	chr_7	nadph:protochlorophyllide oxidoreductase a (PLN00015)	659151	660424	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0180

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0023	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00015		protochlorophyllide reductase	cl09931	569.724	0	17 - 324	specific	177654
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	569.724	0	17 - 324	superfamily	263925
FabG		Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [...	-	73.6985	1.91E-15	13 - 164	multi-dom	223959

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
5077		Not available	267731	248228	63485	Cre01.g015350.t1.1	AT5G54190.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments