PHATRDRAFT_12431 phospholipase d (PLN02270)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12431 chr_8 phospholipase d (PLN02270) 796946 799556 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0409

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0251
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLDc_pPLD_like_2 Catalytic domain, repeat 2, of plant phospholipase D and similar proteins; Catalytic domain, repeat... cl15239 381.004 6.04E-127 484 - 696 specific 197240
PLDc_SF superfamily Catalytic domain of phospholipase D superfamily proteins; Catalytic domain of phospholipase D (PLD... - 36.7747 0.00713337 385 - 415 superfamily 265651
PLDc_pPLD_like_1 Catalytic domain, repeat 1, of plant phospholipase D and similar proteins; Catalytic domain, repeat... cl15239 295.46 1.21E-94 192 - 367 specific 197237
PLDc_SF superfamily Catalytic domain of phospholipase D superfamily proteins; Catalytic domain of phospholipase D (PLD... - 36.7747 0.00713337 385 - 415 superfamily 265651
PLD_C superfamily Phospholipase D C terminal; This domain family is found in eukaryotes, and is approximately 70... - 117.988 2.58E-31 721 - 793 superfamily 257003
PLD_C superfamily Phospholipase D C terminal; This domain family is found in eukaryotes, and is approximately 70... - 117.988 2.58E-31 721 - 793 superfamily 257003
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 80.8112 1.69E-17 1 - 117 superfamily 265430
PLDc_SF superfamily Catalytic domain of phospholipase D superfamily proteins; Catalytic domain of phospholipase D (PLD... - 36.7747 0.00713337 385 - 415 superfamily 265651
PLN02270 phospholipase D alpha - 576.511 0 1 - 801 multi-dom 165912

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261844 Not available Not available Not available Not available Not available AT4G11830.2 264911

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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