PHATRDRAFT_12562 e3 ubiquitin protein ligaseexpressed (HECTc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12562 chr_9 e3 ubiquitin protein ligaseexpressed (HECTc) 411497 412651 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0292

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... cl00077 434.685 2.09E-151 28 - 379 specific 238033
HECTc superfamily HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... - 434.685 2.09E-151 28 - 379 superfamily 260176
HECTc Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2... - 407.775 4.06E-141 56 - 381 multi-dom 214523

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33759 Not available 169500 326262 Not available Cre01.g012450.t1.1 AT1G55860.1 529140

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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