PHATRDRAFT_12583 manganese superoxide dismutase (SodA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12583	chr_9	manganese superoxide dismutase (SodA)	736922	737572	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0111

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0104	0.29	81 81

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sod_Fe_C superfamily		Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyse the...	-	159.379	1.40E-49	91 - 201	superfamily	251524
Sod_Fe_C superfamily		Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyse the...	-	159.379	1.40E-49	91 - 201	superfamily	251524
Sod_Fe_N superfamily		Iron/manganese superoxide dismutases, alpha-hairpin domain; superoxide dismutases (SODs) catalyse...	-	98.1277	2.34E-26	1 - 82	superfamily	249570
SodA		Superoxide dismutase [Inorganic ion transport and metabolism]	-	256.425	2.55E-86	1 - 201	multi-dom	223678

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32874		Not available	185706	308940	364889	Cre02.g096150.t1.2	Not available	285170

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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