PHATRDRAFT_12605 excinucleaseb subunit (PRK05298)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12605 chr_9 excinucleaseb subunit (PRK05298) 141472 143316 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0173

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 107.709 2.03E-27 435 - 566 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 107.709 2.03E-27 435 - 566 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 60.814 5.57E-11 32 - 105 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 60.814 5.57E-11 32 - 105 superfamily 266587
UvrB superfamily Ultra-violet resistance protein B; This domain family is found in bacteria, archaea and eukaryotes... - 63.6095 9.78E-13 565 - 603 superfamily 256994
UvrB superfamily Ultra-violet resistance protein B; This domain family is found in bacteria, archaea and eukaryotes... - 63.6095 9.78E-13 565 - 603 superfamily 256994
PRK05298 excinuclease ABC subunit B; Provisional - 847.794 0 1 - 596 multi-dom 235395

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 192788 296136 453506 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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