PHATRDRAFT_12642 ornithine decarboxylase 1 (PLPDE_III_ODC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12642 chr_9 ornithine decarboxylase 1 (PLPDE_III_ODC) 945947 947934 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0391

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLPDE_III_ODC Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase; This subfamily is... cl00261 478.912 1.83E-168 4 - 387 specific 143482
PLPDE_III superfamily Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes; The fold type III PLP-dependent enzyme... - 478.912 1.83E-168 4 - 387 superfamily 260308
LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism] - 262.598 1.35E-83 7 - 381 multi-dom 223098

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32477 Not available Not available Not available 435210 Cre03.g159500.t1.2 Not available 474019

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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