PHATRDRAFT_12731 proteasome beta 3 subunit (Ntn_hydrolase superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12731	chr_9	proteasome beta 3 subunit (Ntn_hydrolase superfamily)	519752	520435	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0301

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0115	0.43	0.00000000089 20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ntn_hydrolase superfamily		The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are...	-	183.213	1.43E-57	2 - 222	superfamily	260443
PRE1		20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,...	-	103.532	1.12E-26	1 - 218	multi-dom	223711

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
18407		Not available	231614	68921	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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