PHATRDRAFT_13047 (CAP_C)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13047	chr_10	(CAP_C)	891868	892281	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0188

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0089	0.28	4.3 8000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CARP superfamily		Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product;...	-	34.0305	0.00104086	18 - 55	superfamily	197827
CARP superfamily		Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product;...	-	34.0305	0.00104086	18 - 55	superfamily	197827
CAP_C		Adenylate cyclase associated (CAP) C terminal; Adenylate cyclase associated (CAP) C terminal.	-	140.801	7.22E-43	2 - 136	multi-dom	254913

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	252941	249042	Not available	Cre06.g304100.t1.2	AT4G34490.1	549399

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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