PHATRDRAFT_13192 cdc5 cell division cycle 5-like (SANT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13192	chr_10	cdc5 cell division cycle 5-like (SANT)	831203	831424	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0396

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0019	0.43	550 930

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	44.8738	3.59E-08	11 - 54	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	44.8738	3.59E-08	11 - 54	superfamily	266586
SANT_CDC5_II superfamily		SANT/myb-like DNA-binding domain of Cell Division Cycle 5-Like Protein repeat II; In humans, cell...	-	34.2074	0.000255829	56 - 74	superfamily	212557

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31881		Not available	209482	253934	357624	Cre03.g197350.t1.2	AT1G09770.1	495212

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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