PHATRDRAFT_13240 protease do-like (s2 serine-type protease) (Trypsin_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13240 chr_11 protease do-like (s2 serine-type protease) (Trypsin_2) 681619 682686 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0343

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0244
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PDZ_serine_protease PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins... cl00117 58.0348 4.55E-11 232 - 319 specific 238487
PDZ superfamily PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... - 58.0348 4.55E-11 232 - 319 superfamily 260201
Trypsin_2 Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. cl19303 88.8393 9.69E-22 57 - 193 specific 257693
Trypsin_2 superfamily Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. - 88.8393 9.69E-22 57 - 193 superfamily 267656

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36037 Not available 278335 157705 67415 Cre12.g498500.t1.2 AT3G27925.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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