PHATRDRAFT_13322 had superfamily protein involved in n-acetyl-glucosamine catabolism-like (HAD-SF-IIA-hyp4)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13322 chr_11 had superfamily protein involved in n-acetyl-glucosamine catabolism-like (HAD-SF-IIA-hyp4) 642658 643542 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0412

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0243
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 40.0459 0.000101506 4 - 92 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 40.0459 0.000101506 4 - 92 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 40.0459 0.000101506 4 - 92 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 40.0459 0.000101506 4 - 92 superfamily 119389
HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459; This hypothetical equivalog is a member of the... - 152.354 2.88E-44 1 - 254 multi-dom 130526

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 213551 168540 212652 Cre14.g609300.t1.2 AT5G10460.1 486145

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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