PHATRDRAFT_13358 petc (photosynthetic electron transfer c) (PRK13474)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13358 chr_11 petc (photosynthetic electron transfer c) (PRK13474) 107403 108391 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0193

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0173
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rieske_cytochrome_b6f Iron-sulfur protein (ISP) component of the b6f complex family, Rieske domain; The Rieske domain is... cl00938 248.049 1.20E-84 52 - 177 specific 239553
Rieske superfamily Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (... - 248.049 1.20E-84 52 - 177 superfamily 260709
CytB6-F_Fe-S superfamily Cytochrome B6-F complex Fe-S subunit; The cytochrome B6-F complex mediates electron transfer... - 44.2079 3.10E-07 10 - 43 superfamily 255047
CytB6-F_Fe-S superfamily Cytochrome B6-F complex Fe-S subunit; The cytochrome B6-F complex mediates electron transfer... - 44.2079 3.10E-07 10 - 43 superfamily 255047
PRK13474 cytochrome b6-f complex iron-sulfur subunit; Provisional - 273.451 6.39E-94 13 - 177 multi-dom 237392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
26131 Not available 268792 186712 45249 Cre11.g467689.t1.1 AT4G03280.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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