PHATRDRAFT_13511 gamma-adaptin 1 (Adaptin_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13511 chr_11 gamma-adaptin 1 (Adaptin_N) 199703 202713 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0058

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Alpha_adaptinC2 Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation... cl03759 80.8577 8.87E-18 827 - 935 specific 251591
Alpha_adaptinC2 superfamily Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation... - 80.8577 8.87E-18 827 - 935 superfamily 261874
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 37.4115 0.00250211 714 - 816 superfamily 257944
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 37.4115 0.00250211 714 - 816 superfamily 257944
Adaptin_N Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and... - 355.377 2.09E-111 25 - 628 multi-dom 250737

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269744 Not available 253817 208475 416541 Cre16.g676650.t1.2 AT1G23900.2 478083

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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