PHATRDRAFT_13534 estrogen receptor binding protein (Fcf2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13534	chr_11	estrogen receptor binding protein (Fcf2)	541304	541666	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0202

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0118	0.28	140 210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fcf2 superfamily		Fcf2 pre-rRNA processing; This is a family of eukaryotic nucleolar proteins that are involved in...	-	104.32	1.03E-29	6 - 96	superfamily	254980
Fcf2 superfamily		Fcf2 pre-rRNA processing; This is a family of eukaryotic nucleolar proteins that are involved in...	-	104.32	1.03E-29	6 - 96	superfamily	254980

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34357		Not available	198858	237909	Not available	Cre03.g194150.t1.1	AT5G30495.1	536074

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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