PHATRDRAFT_14618 atph+mitochondrial f1alpha subunitcardiac muscle (PRK09281)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14618 chr_15 atph+mitochondrial f1alpha subunitcardiac muscle (PRK09281) 196527 198056 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0193

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0126
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
F1_ATPase_alpha F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes,... cl17233 554.179 0 98 - 373 specific 238552
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 554.179 0 98 - 373 superfamily 266574
ATP-synt_ab_N superfamily ATP synthase alpha/beta family, beta-barrel domain; This family includes the ATP synthase alpha and... - 77.1813 1.70E-17 29 - 96 superfamily 251583
ATP-synt_ab_N superfamily ATP synthase alpha/beta family, beta-barrel domain; This family includes the ATP synthase alpha and... - 77.1813 1.70E-17 29 - 96 superfamily 251583
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 78.083 2.32E-17 382 - 469 superfamily 249758
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 78.083 2.32E-17 382 - 469 superfamily 249758
PRK09281 F0F1 ATP synthase subunit alpha; Validated - 918.304 0 28 - 509 multi-dom 236448

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd1287 Not available 210953 210712 433142 Cre02.g116750.t1.1 ATCG00120.1 348089

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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