PHATRDRAFT_14937 carbon dioxide concentrating mechanism protein (TIGR00275)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14937	chr_17	carbon dioxide concentrating mechanism protein (TIGR00275)	46828	48138	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0260

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0058	0.36	0.63 560

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	93.3429	2.69E-21	1 - 420	superfamily	267487
TIGR00275		flavoprotein, HI0933 family; The model when searched with a partial length search brings in...	-	348.428	4.04E-116	1 - 415	multi-dom	232901

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35087		Not available	187061	155517	457403	Cre09.g389400.t1.1	AT5G39940.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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