PHATRDRAFT_14945 golgi membrane protein sb140 isoform 1 (YIP1 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14945	chr_17	golgi membrane protein sb140 isoform 1 (YIP1 superfamily)	256779	257458	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0427

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0006	0.56	780 24000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YIP1 superfamily		Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]	-	124.118	7.40E-35	10 - 196	superfamily	227412

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38331		Not available	180792	178862	429722	Not available	AT2G36300.1	540638

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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