PHATRDRAFT_15212 abc transporter related (ABC_subfamily_A)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15212 chr_18 abc transporter related (ABC_subfamily_A) 536183 539362 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0371

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_subfamily_A ATP-binding cassette domain of the lipid transporters, subfamily A; The ABCA subfamily mediates the... cl17201 247.418 6.07E-79 271 - 475 specific 213230
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 247.418 6.07E-79 271 - 475 superfamily 266551
ABC_subfamily_A ATP-binding cassette domain of the lipid transporters, subfamily A; The ABCA subfamily mediates the... cl17201 247.418 6.07E-79 271 - 475 specific 213230
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 247.418 6.07E-79 271 - 475 superfamily 266551
SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] - 114.914 1.26E-29 243 - 466 multi-dom 224059
CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] - 224.879 3.13E-69 8 - 207 multi-dom 224054

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
16722 Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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