PHATRDRAFT_15281 vacuolar transporter (VTC1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15281	chr_19	vacuolar transporter (VTC1)	314760	315098	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0213

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0085	0.45	490000 680000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
VTC1		Vacuolar transporter chaperone [Posttranslational modification, protein turnover, chaperones]	cl09954	105.151	7.76E-30	1 - 106	specific	227589
DUF202 superfamily		Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which...	-	105.151	7.76E-30	1 - 106	superfamily	263935

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38190		Not available	181535	202089	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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