PHATRDRAFT_15294 trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase (tRNA_Me_trans)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15294	chr_19	trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase (tRNA_Me_trans)	597559	598662	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0246

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0024	0.42	0.018 2.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
tRNA_Me_trans		tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-...	cl00292	420.775	3.39E-146	1 - 366	specific	238956
AANH_like superfamily		Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases...	-	420.775	3.39E-146	1 - 366	superfamily	260331
tRNA_Me_trans		tRNA methyl transferase; This family represents tRNA(5-methylaminomethyl-2-thiouridine)-...	-	414.337	1.08E-143	1 - 366	multi-dom	251696

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
37327		Not available	182371	258802	70246	Cre14.g628000.t1.2	AT1G51310.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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