PHATRDRAFT_15338 smad nuclear interacting protein (FHA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15338	chr_19	smad nuclear interacting protein (FHA)	281005	281514	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0457

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0054	0.38	630 2100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FHA		Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear...	cl00062	87.0566	2.24E-22	47 - 153	specific	238017
FHA superfamily		Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear...	-	87.0566	2.24E-22	47 - 153	superfamily	260165
COG1716		FOG: FHA domain [Signal transduction mechanisms]	-	53.8062	8.45E-10	65 - 169	multi-dom	224630

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262193		Not available	210715	161570	62540	Cre09.g390430.t1.1	AT3G20550.1	471247

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments