PHATRDRAFT_15852 copper zinc superoxide dismutasensodb (Cu-Zn_Superoxide_Dismutase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15852	chr_21	copper zinc superoxide dismutasensodb (Cu-Zn_Superoxide_Dismutase)	405275	405811	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0114

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0159	0.19	680 4500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cu-Zn_Superoxide_Dismutase		Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide...	cl00891	133.155	4.58E-40	1 - 130	specific	238186
Cu-Zn_Superoxide_Dismutase superfamily		Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide...	-	133.155	4.58E-40	1 - 130	superfamily	260683

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	269494	220645	Not available	Not available	AT1G08830.2	358096

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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