PHATRDRAFT_15863 mitochondrial single-subunit rna polymerase (RNA_pol)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15863	chr_22	mitochondrial single-subunit rna polymerase (RNA_pol)	386948	389075	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0203

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0187	0.25	2000 160000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNA_pol superfamily		DNA-dependent RNA polymerase; This is a family of single chain RNA polymerases.	-	537.202	0	192 - 575	superfamily	250244
RNA_pol superfamily		DNA-dependent RNA polymerase; This is a family of single chain RNA polymerases.	-	537.202	0	192 - 575	superfamily	250244
RPOL_N superfamily		DNA-directed RNA polymerase N-terminal; This is the N-terminal domain of DNA-directed RNA...	-	83.1248	8.30E-18	12 - 72	superfamily	258838

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32395		Not available	191644	236306	42597	Cre02.g075600.t1.1	AT5G15700.1	354222

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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