PHATRDRAFT_16509 complex 1lyr family (Complex1_LYR_1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16509	chr_26	complex 1lyr family (Complex1_LYR_1)	123470	123673	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0388

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0129	0.31	0.44 79

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Complex1_LYR_1		Complex1_LYR-like; This is a family of proteins carrying the LYR motif of family Complex1_LYR,...	cl05087	53.3518	2.71E-11	2 - 68	specific	257590
Complex1_LYR_1 superfamily		Complex1_LYR-like; This is a family of proteins carrying the LYR motif of family Complex1_LYR,...	-	53.3518	2.71E-11	2 - 68	superfamily	262428

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	155567	147440	Not available	Cre01.g028150.t1.2	AT1G76060.1	341187

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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