PHATRDRAFT_16649 hydroxymethylglutaryl coenzyme a synthase (PLN02577)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16649	chr_27	hydroxymethylglutaryl coenzyme a synthase (PLN02577)	96692	98321	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0224

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0135	0.29	3000 1200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
init_cond_enzymes		"initiating" condensing enzymes are a subclass of decarboxylating condensing...	cl09938	199.196	2.57E-59	3 - 384	specific	238423
cond_enzymes superfamily		Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating)...	-	199.196	2.57E-59	3 - 384	superfamily	263929
PLN02577		hydroxymethylglutaryl-CoA synthase	-	701.885	0	1 - 461	multi-dom	178189

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
260768		Not available	185767	201357	448559	Cre16.g678850.t1.1	AT4G11820.2	516045

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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