PHATRDRAFT_16962 ribosomal subunit interface protein (RaiA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16962	chr_30	ribosomal subunit interface protein (RaiA)	129234	129992	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0180	0.25	1.3 45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RaiA		RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and...	cl00250	86.0297	8.40E-22	12 - 108	specific	238308
RaiA superfamily		RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and...	-	86.0297	8.40E-22	12 - 108	superfamily	260300

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31006		Not available	217820	210509	439209	Cre05.g237450.t1.2	AT5G24490.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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