PHATRDRAFT_17043 drug resistance atpase-1 (drug ra1) abc transporteratp-binding protein (Uup)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17043 chr_31 drug resistance atpase-1 (drug ra1) abc transporteratp-binding protein (Uup) 50273 51949 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0085
 0.45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 157.996 1.36E-45 11 - 248 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 157.996 1.36E-45 11 - 248 superfamily 266551
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 157.996 1.36E-45 11 - 248 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 157.996 1.36E-45 11 - 248 superfamily 266551
ABC_tran_2 superfamily ABC transporter; This domain is related to pfam00005. - 76.0767 9.19E-17 243 - 329 superfamily 257346
ABC_tran_2 superfamily ABC transporter; This domain is related to pfam00005. - 76.0767 9.19E-17 243 - 329 superfamily 257346
Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction... - 554.938 0 11 - 552 multi-dom 223562

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40554 Not available 198218 247826 464368 Cre08.g372250.t1.2 AT5G64840.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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