PHATRDRAFT_17228 dna polymerase i (53EXOc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17228 chr_1 dna polymerase i (53EXOc) 289687 290856 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0189

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIN_53EXO PIN domain of the 5'-3' exonuclease of Taq DNA polymerase I and homologs; The 5... cl14812 212.676 3.88E-67 61 - 228 specific 189029
PIN_SF superfamily PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a... - 212.676 3.88E-67 61 - 228 superfamily 265458
H3TH_53EXO H3TH domain of the 5'-3' exonuclease of Taq DNA polymerase I and homologs; H3TH (... cl14815 108.255 3.91E-29 234 - 307 specific 188618
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 108.255 3.91E-29 234 - 307 superfamily 265460
53EXOc 5'-3' exonuclease; 5'-3' exonuclease. - 298.354 3.39E-99 59 - 314 multi-dom 214682

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262348 Not available 194632 263530 463107 Not available AT3G52050.4 501578

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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