PHATRDRAFT_18246 5-enolpyruvylshikimate-3-phosphate synthase (PLN02338)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_18246	chr_2	5-enolpyruvylshikimate-3-phosphate synthase (PLN02338)	915349	916800	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0142

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0246	0.27	47 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EPSP_synthase		EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-...	cl00288	472.812	5.85E-164	56 - 480	specific	238797
EPT_RTPC-like superfamily		This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3'...	-	472.812	5.85E-164	56 - 480	superfamily	260328
PLN02338		3-phosphoshikimate 1-carboxyvinyltransferase	-	769.299	0	50 - 483	multi-dom	177972

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33008		Not available	226008	202778	Not available	Cre03.g181300.t1.2	AT2G45300.1	343591

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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