PHATRDRAFT_18280 atp-dependent dna helicasefamily protein (recQ_fam)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18280 chr_2 atp-dependent dna helicasefamily protein (recQ_fam) 1007835 1009411 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0436

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 108.479 4.13E-28 210 - 346 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 108.479 4.13E-28 210 - 346 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 85.852 7.63E-20 30 - 181 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 85.852 7.63E-20 30 - 181 superfamily 266587
RQC superfamily RQC domain; This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn... - 44.8263 3.83E-06 426 - 504 superfamily 263825
recQ_fam ATP-dependent DNA helicase, RecQ family; All proteins in this family for which functions are known... - 444.598 1.17E-151 8 - 482 multi-dom 129701

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268582 Not available 214982 264303 70855 Cre04.g219750.t1.1 AT1G10930.1 312852

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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