PHATRDRAFT_18473 atp-bindingsub-family b (mdr tap)member 10 (MdlB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18473 chr_3 atp-bindingsub-family b (mdr tap)member 10 (MdlB) 218051 220144 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0357

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0189
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_MTABC3_MDL1_MDL2 ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins; MTABC3 (also... cl17201 386.125 2.67E-130 401 - 639 specific 213216
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 386.125 2.67E-130 401 - 639 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 145.514 2.61E-39 50 - 343 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 145.514 2.61E-39 50 - 343 superfamily 250039
MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] - 482.699 3.93E-163 35 - 640 multi-dom 224055

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
799 Not available 214842 Not available 76857 Not available Not available 522693

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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