PHATRDRAFT_18622 dna replication licensing factorexpressed (MCM)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_18622	chr_3	dna replication licensing factorexpressed (MCM)	709118	711544	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0184

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0147	0.26	220 7400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	36.3551	0.00864604	417 - 531	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	36.3551	0.00864604	417 - 531	superfamily	267297
MCM_N superfamily		MCM N-terminal domain; This family contains the N-terminal region of MCM proteins. This region is...	-	103.836	9.07E-26	81 - 205	superfamily	258689
MCM_N superfamily		MCM N-terminal domain; This family contains the N-terminal region of MCM proteins. This region is...	-	103.836	9.07E-26	81 - 205	superfamily	258689
MCM		minichromosome maintenance proteins; minichromosome maintenance proteins.	-	660.879	0	188 - 699	multi-dom	214631

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
29936		Not available	212387	209470	62542	Cre07.g338000.t1.2	AT1G44900.2	480390

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments