PHATRDRAFT_18826 abc transporter c family protein (ABCC_MRP_domain2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18826 chr_3 abc transporter c family protein (ABCC_MRP_domain2) 1401276 1404967 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0484

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0030
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCC_MRP_domain2 ATP-binding cassette domain 2 of multidrug resistance-associated protein; The ABC subfamily C is... cl17201 367.589 1.02E-118 884 - 1105 specific 213211
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 319.415 4.43E-101 263 - 465 superfamily 266551
ABCC_MRP_domain1 ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C; This... cl17201 319.415 4.43E-101 263 - 465 specific 213217
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 319.415 4.43E-101 263 - 465 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 98.134 3.15E-22 1 - 209 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 98.134 3.15E-22 1 - 209 superfamily 250039
MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] - 339.79 1.67E-103 601 - 1123 multi-dom 224055
CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] - 88.5184 4.03E-19 273 - 548 multi-dom 224054

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
7202 Not available 214268 238800 430601 Cre17.g734612.t1.1 Not available 329490

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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