PHATRDRAFT_1905 ibr domain protein (IBR)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1905 chr_31 ibr domain protein (IBR) 79481 80834 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0338

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0233
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 35.4992 0.00309665 79 - 103 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 35.4992 0.00309665 79 - 103 superfamily 266579
IBR In Between Ring fingers; the domains occurs between pairs og RING fingers cl19760 55.4988 4.58E-10 148 - 216 specific 214763
IBR superfamily IBR domain; The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring... - 39.5061 0.000167794 239 - 279 superfamily 268113
IBR IBR domain; The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring... cl19760 39.5061 0.000167794 239 - 279 specific 250654
IBR superfamily IBR domain; The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring... - 39.5061 0.000167794 239 - 279 superfamily 268113

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33851 Not available 154311 328377 430487 Cre16.g682350.t1.1 AT1G05890.1 535714

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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