PHATRDRAFT_19699 1-aminocyclopropane-1-carboxylate synthase (AAT_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_19699	chr_6	1-aminocyclopropane-1-carboxylate synthase (AAT_like)	502381	503892	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0244

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0190	0.25	44000 50000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_like		Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent...	cl18945	161.355	1.23E-44	129 - 497	specific	99734
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	161.355	1.23E-44	129 - 497	superfamily	267298
PTZ00433		tyrosine aminotransferase; Provisional	-	69.8154	3.65E-13	67 - 481	multi-dom	185613

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
14417		Not available	178412	193708	469924	Not available	AT4G08040.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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