PHATRDRAFT_20677 short-chain dehydrogenase reductase sdr (NADB_Rossmann superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20677 chr_9 short-chain dehydrogenase reductase sdr (NADB_Rossmann superfamily) 818715 819425 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0355

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0100
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 200.687 1.09E-63 5 - 236 superfamily 263925
COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] - 109.65 8.14E-29 4 - 236 multi-dom 226674

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 262975 Not available 373405 Not available AT3G50560.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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